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RTGreen (~EvaGreen, SYBR Green I, LC Green)
Realtime qPCR with RTGreen
RTGreen 20× in water ; Concentration: 20× (25 uM) in water; Appearance: Orange solution
RTGreen (the ideal substitute for Sybr Green and EvaGreen) is a very sensitive dye for the detection of double stranded DNA (dsDNA). The dye is a green fluorescent nucleic acid dye with features that make it useful for non-specific detection of amplification in realtime qPCR experiments. Compared with the widely used SYBR Green I, RTGreen dye is generally less inhibitory toward PCR and less likely to cause nonspecific amplification , RTGreen dye can be used at a much higher dye concentration than SYBR Green I, resulting in more robust PCR signal. The PCR reaction can be monitored using our existing optical setting for SYBR Green I or FAM on any commercial real-time PCR cycler. The qPCR protocol provided below is for PCR using regular non-hot-start Taq. Use of a hot-start Taq may require some adjustment of PCR buffer composition in terms of ionic strength and pH to best take the advantage of RTGreen dye. The water soluble solvent such as DMSO or glycerol are frequently added to stabilize master mixes. These components and pH may need to be optimized depending on the enzyme used.
Protocol
Calculate the volumes of reagents required for the reaction.
|
Reagent |
Final concentration in the mixture |
|
dNTP |
0.2mM each |
|
ddH2O |
Adjust to final volume |
|
Taq polymerase buffer without magnesium |
1× |
|
Each of primers |
0.1-1 uM |
|
Taq DNA polymerase |
1-5 units per reaction |
|
MgCl2 |
2.5 mM |
|
RTGreen |
1× |
1. On ice, prepare a 1x master mix containing no DNA, by mixing the components in the following order: water, Taq polymerase buffer, dNTPs, MgCl2, RTGreen, Taq polymerase, and primers.
2. Transfer master mix to tubes or plates. Add DNA (50 ng per reaction).
3. Proceed with amplification according to your instrument manufacturer. Perform real-time PCR on a thermocycling fluorometer and record the fluorescence signal at the annealing or extension step.
Notes:
1) Always use positive and negative controls when doing qPCR experiments.
2) The temperature program for the qPCR amplification does not differ from standard PCR program for the given template and primers.
3) For the detection, FAM or FAM/SYBR channel should be used.
4) NOTE: Always wear lab coats, gloves and goggles when working with our products although they are low-risk chemicals for R&D only.
特别提醒:
1) 本公司所有产品仅限于专业人员用于生命科学研究,不得用于临床诊断或治疗,不得用于食品或药品,不得存放于普通住宅。
2) 本公司所有产品必须由合格专业技术人员操作同时佩戴口罩/手套/实验服并遵守生物实验室安全操作规程!
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